Local package install (required)

Last modified: 2023-05-06

The entire pipeline makes use of the local top_fibers_pkg Python package. If you correctly initialize your environment (see Setting up the conda environment) then you should automatically have access to this package.

If for some reason this does not work, you can install the package locally yourself in the following way.

Change your current working directory to the package directory

 # Assumes you are on `Lenny`
 cd /home/data/apps/topfibers/repo/package

Use the pip local install
```
 pip install -e .
```